BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035A06SP1|AL429981
(904 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1452 1695 0.0
>3x_Contig1452
Length = 10057
Score = 1695 bits (842), Expect = 0.0
Identities = 874/900 (97%)
Strand = Plus / Minus
Query: 1 ttctctcagtattccactgcttcaatttagactcgtaattgttcagagcttctttttcga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1129 ttctctcagtattccactgcttcaatttagactcgtaattgttcagagcttctttttcga 1070
Query: 61 cttttaaatctttttcactaaccctcttatcatttaatcgattccttagctttttggtct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1069 cttttaaatctttttcactaaccctcttatcatttaatcgattccttagctttttggtct 1010
Query: 121 ggtccgccagcttattcaaatcgcttgamatatatgacaattgctgttcctttttcgcaa 180
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1009 ggtccgccagcttattcaaatcgcttgaaatatatgacaattgctgttcctttttcgcaa 950
Query: 181 acgaatttcgtaaaactgataatttctcctccaatgtagtttcttcgaaatggtgtttgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 949 acgaatttcgtaaaactgataatttctcctccaatgtagtttcttcgaaatggtgtttgg 890
Query: 241 caagcaggctttcaaggttcttattggctgtatggagcatcgttgagacttctgatgtta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 889 caagcaggctttcaaggttcttattggctgtatggagcatcgttgagacttctgatgtta 830
Query: 301 cggattccttagaaatattgtacaactccgmtagttctgttagmmtggtgttcattttga 360
|||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||
Sbjct: 829 cggattccttagaaatattgtacaactccgatagttctgttagaatggtgttcattttga 770
Query: 361 tttttgaggtctcatattggttttttttagagcctmattcgccctgcmatcttaccactt 420
||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 769 tttttgaggtctcatattggttttttttagagcctaattcgccctgcaatcttaccactt 710
Query: 421 cttgctgctcmtttctacmatcgtttaatamagataammgtctttctttttctgattgat 480
|||||||||| ||||||| ||||||||||| |||||| |||||||||||||||||||||
Sbjct: 709 cttgctgctcatttctacaatcgtttaataaagataaaagtctttctttttctgattgat 650
Query: 481 attcmmatagttctatattcttctcctctmataatctttgamaattctgaagcatgtcct 540
|||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 649 attcaaatagttctatattcttctcctctaataatctttgaaaattctgaagcatgtcct 590
Query: 541 ccaactcactcttagaatttggtngnatttctancgnggattgtcacctttgtatctgtt 600
||||||||||||||||||||||| | ||||||| || ||||||| |||||||||||||||
Sbjct: 589 ccaactcactcttagaatttggtagaatttctatcgaggattgtaacctttgtatctgtt 530
Query: 601 ccataaatgatgttttattatgtttgaggttatccaacttggacaaggtttcttkaaatt 660
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 529 ccataaatgatgttttattatgtttgaggttatccaacttggacaaggtttcttgaaatt 470
Query: 661 tttkatttkaactgaaaagtgcatctgattcctttgtgattatatttaggtcatgttcaa 720
||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 tttgatttgaactgaaaagtgcatctgattcctttgtgattatatttaggtcatgttcaa 410
Query: 721 tgctcttcacttctttttgatactcttctattttgttctccagtttagatatgtttacct 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 tgctcttcacttctttttgatactcttctattttgttctccagtttagatatgtttacct 350
Query: 781 tggtcgcggtagacctatctttatctgttttcagatgctctacggattkttttaataatt 840
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 349 tggtcgcggtagacctatctttatctgttttcagatgctctacggattgttttaataatt 290
Query: 841 tkatatcaatagatatatccttcttgatggttttgaggttgtctaatgccttagtkaact 900
| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 289 tgatatcaatagatatatccttcttgatggttttgaggttgtctaatgccttagtgaact 230
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.32
Gapped
Lambda K H
1.40 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6454
Number of Sequences: 1807
Number of extensions: 6454
Number of successful extensions: 125
Number of sequences better than 1.0e-20: 1
length of query: 904
length of database: 10,358,551
effective HSP length: 16
effective length of query: 888
effective length of database: 10,329,639
effective search space: 9172719432
effective search space used: 9172719432
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.6 bits)
S2: 50 (101.2 bits)